Carnation DB

Dca35873.1

Annotation

5-exons
f-1
sp|B9ILY6_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_578592#GO:0006396#0F1P0C
Os11t0657300-01 Similar to Small nuclear ribonucleoprotein F (snRNP-F) (Sm protein F) (Sm-F) (SmF).
Repeat List (scaffold3754)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca35873.1	1	88	88	88.63	88	89	4e-40
Target_name	Start	End	Length	Cov(%)
sp\|B9ILY6_POPTR	1	88	88	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca35873.1	1	86	88	86.36	86	89	8e-40
Target_name	Start	End	Length	Cov(%)
Os11t0657300-01	1	86	87	98.85

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3754	Augustus	mRNA	2546	5201	.	-	.	ID=Dca35873.1;Parent=Dca35873
scaffold3754	Augustus	exon	2546	2615	.	-	.	ID=Dca35873.1.exon1;Parent=Dca35873.1
scaffold3754	Augustus	exon	3399	3463	.	-	.	ID=Dca35873.1.exon2;Parent=Dca35873.1
scaffold3754	Augustus	exon	3589	3626	.	-	.	ID=Dca35873.1.exon3;Parent=Dca35873.1
scaffold3754	Augustus	exon	4104	4191	.	-	.	ID=Dca35873.1.exon4;Parent=Dca35873.1
scaffold3754	Augustus	exon	5196	5201	.	-	.	ID=Dca35873.1.exon5;Parent=Dca35873.1