Carnation DB

Dca35914.1

Annotation

9-exons
f-1
sp|B9IEZ0_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_252306#GO:0008270#1F0P0C
AT4G24690.1 | Symbols: | ubiquitin-associated (UBA)/TS-N domain-containing protein / octicosapeptide/Phox/Bemp1 (PB1) domain-containing protein | chr4:12741191-12744202 FORWARD LENGTH=704
Repeat List (scaffold376)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca35914.1	11	728	729	35.52	718	34	1e-90
Target_name	Start	End	Length	Cov(%)
sp\|B9IEZ0_POPTR	1	673	673	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca35914.1	4	728	729	38.68	725	36	2e-89
Target_name	Start	End	Length	Cov(%)
AT4G24690.1	3	702	704	99.43

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold376	Augus-PASA	mRNA	59516	64467	.	-	.	ID=Dca35914.1;Parent=Dca35914
scaffold376	Augus-PASA	exon	59516	59614	.	-	.	ID=Dca35914.1.exon1;Parent=Dca35914.1
scaffold376	Augus-PASA	exon	59857	60363	.	-	.	ID=Dca35914.1.exon2;Parent=Dca35914.1
scaffold376	Augus-PASA	exon	60881	61030	.	-	.	ID=Dca35914.1.exon3;Parent=Dca35914.1
scaffold376	Augus-PASA	exon	61146	61364	.	-	.	ID=Dca35914.1.exon4;Parent=Dca35914.1
scaffold376	Augus-PASA	exon	61451	61553	.	-	.	ID=Dca35914.1.exon5;Parent=Dca35914.1
scaffold376	Augus-PASA	exon	61665	61756	.	-	.	ID=Dca35914.1.exon6;Parent=Dca35914.1
scaffold376	Augus-PASA	exon	61840	61951	.	-	.	ID=Dca35914.1.exon7;Parent=Dca35914.1
scaffold376	Augustus	exon	62071	62942	.	-	.	ID=Dca35914.1.exon8;Parent=Dca35914.1
scaffold376	Augustus	exon	64432	64467	.	-	.	ID=Dca35914.1.exon9;Parent=Dca35914.1