Carnation DB

Dca35933.1

Annotation

5-exons
f-379
sp|B9FM28_ORYSJ#Putative uncharacterized protein#Oryza sativa subsp japonica (Rice)#ORFNames=OsJ_16841#GO:0003677;GO:0004803;GO:0008270;GO:0006313#3F1P0C
sp|Q94HK4_ORYSA#Mutator-like transposase#Oryza sativa (Rice)#unknown#GO:0008270#1F0P0C
Repeat List (scaffold3761)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca35933.1	16	218	268	30.59	203	41	6e-37
Target_name	Start	End	Length	Cov(%)
sp\|B9FM28_ORYSJ	573	776	874	23.34

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca35933.1	11	218	268	30.22	208	39	7e-36
Target_name	Start	End	Length	Cov(%)
Os09t0268600-01	55	263	441	47.39

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3761	Augustus	mRNA	16557	20951	.	+	.	ID=Dca35933.1;Parent=Dca35933
scaffold3761	Augustus	exon	16557	16585	.	+	.	ID=Dca35933.1.exon1;Parent=Dca35933.1
scaffold3761	Augustus	exon	18166	18504	.	+	.	ID=Dca35933.1.exon2;Parent=Dca35933.1
scaffold3761	Augustus	exon	19524	20196	.	+	.	ID=Dca35933.1.exon3;Parent=Dca35933.1
scaffold3761	Augustus	exon	20704	20757	.	+	.	ID=Dca35933.1.exon4;Parent=Dca35933.1
scaffold3761	Augustus	exon	20862	20951	.	+	.	ID=Dca35933.1.exon5;Parent=Dca35933.1