Carnation DB

Dca35954.1

Annotation

10-exons
f-1
sp|D7SUI6_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_04s0008g04310#GO:0019898;GO:0009654;GO:0005509;GO:0015979#1F1P2C
AT5G11450.1 | Symbols: | Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein | chr5:3654475-3656357 FORWARD LENGTH=297
Repeat List (scaffold3767)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca35954.1	31	263	263	58.55	233	55	4e-81
Target_name	Start	End	Length	Cov(%)
sp\|D7SUI6_VITVI	6	284	284	98.23

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca35954.1	31	263	263	55.13	233	51	6e-71
Target_name	Start	End	Length	Cov(%)
AT5G11450.1	10	297	297	96.96

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3767	Augustus	mRNA	10963	16960	.	-	.	ID=Dca35954.1;Parent=Dca35954
scaffold3767	Augustus	exon	10963	11061	.	-	.	ID=Dca35954.1.exon1;Parent=Dca35954.1
scaffold3767	Augustus	exon	11544	11593	.	-	.	ID=Dca35954.1.exon2;Parent=Dca35954.1
scaffold3767	Augustus	exon	11975	12029	.	-	.	ID=Dca35954.1.exon3;Parent=Dca35954.1
scaffold3767	Augustus	exon	12121	12180	.	-	.	ID=Dca35954.1.exon4;Parent=Dca35954.1
scaffold3767	Augustus	exon	12514	12573	.	-	.	ID=Dca35954.1.exon5;Parent=Dca35954.1
scaffold3767	Augustus	exon	13728	13747	.	-	.	ID=Dca35954.1.exon6;Parent=Dca35954.1
scaffold3767	Augustus	exon	13940	13989	.	-	.	ID=Dca35954.1.exon7;Parent=Dca35954.1
scaffold3767	Augustus	exon	15524	15632	.	-	.	ID=Dca35954.1.exon8;Parent=Dca35954.1
scaffold3767	Augustus	exon	16413	16588	.	-	.	ID=Dca35954.1.exon9;Parent=Dca35954.1
scaffold3767	Augustus	exon	16848	16960	.	-	.	ID=Dca35954.1.exon10;Parent=Dca35954.1