Carnation DB

Dca35977.1

Annotation

5-exons
f-1
sp|B9GWE6_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_830825#GO:0016021;GO:0004252;GO:0006508#1F1P1C
Os09t0525900-01 Peptidase S54, rhomboid domain containing protein.
Repeat List (scaffold377)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca35977.1	1	332	334	61.67	332	62	7e-123
Target_name	Start	End	Length	Cov(%)
sp\|B9GWE6_POPTR	1	319	321	99.37

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca35977.1	41	332	334	58.98	292	68	6e-115
Target_name	Start	End	Length	Cov(%)
Os09t0525900-01	30	321	324	90.12

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold377	Augustus	mRNA	33423	36111	.	+	.	ID=Dca35977.1;Parent=Dca35977
scaffold377	Augustus	exon	33423	33736	.	+	.	ID=Dca35977.1.exon1;Parent=Dca35977.1
scaffold377	Augustus	exon	35051	35214	.	+	.	ID=Dca35977.1.exon2;Parent=Dca35977.1
scaffold377	Augustus	exon	35409	35572	.	+	.	ID=Dca35977.1.exon3;Parent=Dca35977.1
scaffold377	Augustus	exon	35664	35914	.	+	.	ID=Dca35977.1.exon4;Parent=Dca35977.1
scaffold377	Augustus	exon	36000	36111	.	+	.	ID=Dca35977.1.exon5;Parent=Dca35977.1