Dca36020.1
Annotation
- 2-exons
- f-3
- sp|O81506_ARATH#Putative retrotransposon protein#Arabidopsis thaliana (Mouse-ear cress)#Name=T7M24.7#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold37778)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca36020.1 |
1 |
194 |
194 |
61.85 |
194 |
54 |
1e-60
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O81506_ARATH |
272 |
496 |
964 |
23.34 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca36020.1 |
1 |
63 |
194 |
13.4 |
63 |
40 |
6e-08
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os05t0380700-01 |
46 |
111 |
174 |
37.93 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold37778 |
Augustus |
mRNA |
1 |
670 |
. |
+ |
. |
ID=Dca36020.1;Parent=Dca36020 |
| scaffold37778 |
Augustus |
exon |
1 |
190 |
. |
+ |
. |
ID=Dca36020.1.exon1;Parent=Dca36020.1 |
| scaffold37778 |
Augustus |
exon |
274 |
670 |
. |
+ |
. |
ID=Dca36020.1.exon2;Parent=Dca36020.1 |
