Carnation DB

Dca3608.1

Annotation

6-exons
f-1
sp|F8SME6_CITHY#Germacrene D synthase#Citrus hystrix (Kaffir lime)#unknown#GO:0000287;GO:0010333#2F0P0C
Repeat List (scaffold113)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3608.1	7	460	460	46.08	454	42	4e-97
Target_name	Start	End	Length	Cov(%)
sp\|F8SME6_CITHY	37	541	541	93.34

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3608.1	1	460	460	34.56	460	31	5e-59
Target_name	Start	End	Length	Cov(%)
Os03t0348200-00	7	510	511	98.63

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold113	Augustus	mRNA	33889	39473	.	-	.	ID=Dca3608.1;Parent=Dca3608
scaffold113	Augustus	exon	33889	34185	.	-	.	ID=Dca3608.1.exon1;Parent=Dca3608.1
scaffold113	Augustus	exon	34634	34885	.	-	.	ID=Dca3608.1.exon2;Parent=Dca3608.1
scaffold113	Augustus	exon	36712	36770	.	-	.	ID=Dca3608.1.exon3;Parent=Dca3608.1
scaffold113	Augustus	exon	37155	37300	.	-	.	ID=Dca3608.1.exon4;Parent=Dca3608.1
scaffold113	Augustus	exon	38112	38487	.	-	.	ID=Dca3608.1.exon5;Parent=Dca3608.1
scaffold113	Augustus	exon	39221	39473	.	-	.	ID=Dca3608.1.exon6;Parent=Dca3608.1