Carnation DB

Dca36245.1

Annotation

8-exons
f-1
sp|Q0ZR46_THEHA#Putative uncharacterized protein#Thellungiella halophila (Salt cress)#unknown#GO:0005622;GO:0005525;GO:0003723#2F0P1C
AT5G66470.1 | Symbols: | RNA binding;GTP binding | chr5:26541986-26544302 REVERSE LENGTH=427
Repeat List (scaffold38)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca36245.1	113	401	401	59.6	289	72	1e-139
Target_name	Start	End	Length	Cov(%)
sp\|Q0ZR46_THEHA	94	429	429	78.32

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca36245.1	116	401	401	59.35	286	72	3e-140
Target_name	Start	End	Length	Cov(%)
AT5G66470.1	95	427	427	77.98

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold38	Augus-PASA	mRNA	611197	615138	.	-	.	ID=Dca36245.1;Parent=Dca36245
scaffold38	Augus-PASA	exon	611197	611283	.	-	.	ID=Dca36245.1.exon1;Parent=Dca36245.1
scaffold38	Augus-PASA	exon	611658	611738	.	-	.	ID=Dca36245.1.exon2;Parent=Dca36245.1
scaffold38	Augus-PASA	exon	612367	612468	.	-	.	ID=Dca36245.1.exon3;Parent=Dca36245.1
scaffold38	Augus-PASA	exon	612543	612641	.	-	.	ID=Dca36245.1.exon4;Parent=Dca36245.1
scaffold38	Augus-PASA	exon	612768	612893	.	-	.	ID=Dca36245.1.exon5;Parent=Dca36245.1
scaffold38	Augustus	exon	613122	613235	.	-	.	ID=Dca36245.1.exon6;Parent=Dca36245.1
scaffold38	Augustus	exon	613758	613903	.	-	.	ID=Dca36245.1.exon7;Parent=Dca36245.1
scaffold38	Augustus	exon	614688	615138	.	-	.	ID=Dca36245.1.exon8;Parent=Dca36245.1