Carnation DB

Dca36249.1

Annotation

6-exons
f-1
sp|B9S6E5_RICCO#Syntaxin, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0535810#GO:0016020;GO:0016779;GO:0009058;GO:0016192#1F2P1C
Repeat List (scaffold38)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca36249.1	12	173	179	66.48	162	74	2e-66
Target_name	Start	End	Length	Cov(%)
sp\|B9S6E5_RICCO	7	168	493	32.86

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca36249.1	16	173	179	62.01	158	71	3e-65
Target_name	Start	End	Length	Cov(%)
AT2G18250.1	7	164	176	89.77

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold38	Augustus	mRNA	631601	633796	.	+	.	ID=Dca36249.1;Parent=Dca36249
scaffold38	Augustus	exon	631601	631735	.	+	.	ID=Dca36249.1.exon1;Parent=Dca36249.1
scaffold38	Augustus	exon	631945	632016	.	+	.	ID=Dca36249.1.exon2;Parent=Dca36249.1
scaffold38	Augustus	exon	632261	632320	.	+	.	ID=Dca36249.1.exon3;Parent=Dca36249.1
scaffold38	Augustus	exon	632695	632789	.	+	.	ID=Dca36249.1.exon4;Parent=Dca36249.1
scaffold38	Augustus	exon	633169	633238	.	+	.	ID=Dca36249.1.exon5;Parent=Dca36249.1
scaffold38	Augustus	exon	633689	633796	.	+	.	ID=Dca36249.1.exon6;Parent=Dca36249.1