Carnation DB

Dca36268.1

Annotation

8-exons
f-1
sp|B9SH15_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_0581020#unknown#0F0P0C
sp|G7K2G6_MEDTR#Profilin#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_5g015280#unknown#0F0P0C
Repeat List (scaffold38)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca36268.1	8	386	403	48.88	379	46	8e-99
Target_name	Start	End	Length	Cov(%)
sp\|B9SH15_RICCO	18	440	539	78.47

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca36268.1	327	402	403	9.42	76	50	5e-18
Target_name	Start	End	Length	Cov(%)
AT5G67610.2	422	498	498	15.46

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold38	Augus-PASA	mRNA	814673	819568	.	+	.	ID=Dca36268.1;Parent=Dca36268
scaffold38	Augus-PASA	exon	814673	814763	.	+	.	ID=Dca36268.1.exon1;Parent=Dca36268.1
scaffold38	Augus-PASA	exon	815717	815933	.	+	.	ID=Dca36268.1.exon2;Parent=Dca36268.1
scaffold38	Augus-PASA	exon	816123	816280	.	+	.	ID=Dca36268.1.exon3;Parent=Dca36268.1
scaffold38	Augus-PASA	exon	817198	817343	.	+	.	ID=Dca36268.1.exon4;Parent=Dca36268.1
scaffold38	Augus-PASA	exon	817528	817590	.	+	.	ID=Dca36268.1.exon5;Parent=Dca36268.1
scaffold38	Augustus	exon	817673	817776	.	+	.	ID=Dca36268.1.exon6;Parent=Dca36268.1
scaffold38	Augustus	exon	819044	819216	.	+	.	ID=Dca36268.1.exon7;Parent=Dca36268.1
scaffold38	Augustus	exon	819309	819568	.	+	.	ID=Dca36268.1.exon8;Parent=Dca36268.1