Dca36312.1
Annotation
- 3-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold3803)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca36312.1 |
35 |
314 |
331 |
34.44 |
280 |
35 |
6e-47
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
32 |
364 |
1501 |
22.18 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca36312.1 |
39 |
210 |
331 |
16.01 |
172 |
31 |
3e-16
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0315200-01 |
80 |
251 |
296 |
58.1 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3803 |
Augustus |
mRNA |
7088 |
8381 |
. |
- |
. |
ID=Dca36312.1;Parent=Dca36312 |
| scaffold3803 |
Augustus |
exon |
7088 |
7143 |
. |
- |
. |
ID=Dca36312.1.exon1;Parent=Dca36312.1 |
| scaffold3803 |
Augustus |
exon |
7374 |
7609 |
. |
- |
. |
ID=Dca36312.1.exon2;Parent=Dca36312.1 |
| scaffold3803 |
Augustus |
exon |
7678 |
8381 |
. |
- |
. |
ID=Dca36312.1.exon3;Parent=Dca36312.1 |
