Carnation DB

Dca36438.1

Annotation

5-exons
f-1
sp|Q5KT13_9CARY#Tryptophan synthase beta subunit#Persicaria tinctoria#unknown#GO:0030170;GO:0004834#2F0P0C
Repeat List (scaffold3826)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca36438.1	27	465	465	82.58	439	86	0
Target_name	Start	End	Length	Cov(%)
sp\|Q5KT13_9CARY	27	474	474	94.51

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca36438.1	4	465	465	81.5	462	81	0
Target_name	Start	End	Length	Cov(%)
AT4G27070.1	3	475	475	99.57

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3826	Augus-PASA	mRNA	15997	20073	.	-	.	ID=Dca36438.1;Parent=Dca36438
scaffold3826	Augus-PASA	exon	15997	16172	.	-	.	ID=Dca36438.1.exon1;Parent=Dca36438.1
scaffold3826	Augus-PASA	exon	16830	16924	.	-	.	ID=Dca36438.1.exon2;Parent=Dca36438.1
scaffold3826	Augus-PASA	exon	17023	17465	.	-	.	ID=Dca36438.1.exon3;Parent=Dca36438.1
scaffold3826	Augus-PASA	exon	18886	19242	.	-	.	ID=Dca36438.1.exon4;Parent=Dca36438.1
scaffold3826	Augus-PASA	exon	19747	20073	.	-	.	ID=Dca36438.1.exon5;Parent=Dca36438.1