Dca36494.1
Annotation
- 2-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold3838)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca36494.1 |
188 |
324 |
345 |
14.2 |
137 |
36 |
8e-23
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
3 |
140 |
1501 |
9.19 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca36494.1 |
6 |
166 |
345 |
13.91 |
161 |
30 |
1e-15
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0315200-01 |
85 |
246 |
296 |
54.72 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3838 |
Augustus |
mRNA |
25716 |
31624 |
. |
+ |
. |
ID=Dca36494.1;Parent=Dca36494 |
| scaffold3838 |
Augustus |
exon |
25716 |
26231 |
. |
+ |
. |
ID=Dca36494.1.exon1;Parent=Dca36494.1 |
| scaffold3838 |
Augustus |
exon |
31103 |
31624 |
. |
+ |
. |
ID=Dca36494.1.exon2;Parent=Dca36494.1 |
