Carnation DB

Dca36569.1

Annotation

5-exons
f-1
sp|B9IGK7_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_825391#unknown#0F0P0C
AT5G01720.1 | Symbols: | RNI-like superfamily protein | chr5:267118-270391 REVERSE LENGTH=665
Repeat List (scaffold385)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca36569.1	1	74	74	54.05	74	55	2e-11
Target_name	Start	End	Length	Cov(%)
sp\|B9IGK7_POPTR	86	158	668	10.92

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca36569.1	1	74	74	51.35	74	52	4e-09
Target_name	Start	End	Length	Cov(%)
AT5G01720.1	82	154	665	10.97

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold385	Augustus	mRNA	151741	156013	.	+	.	ID=Dca36569.1;Parent=Dca36569
scaffold385	Augustus	exon	151741	151962	.	+	.	ID=Dca36569.1.exon1;Parent=Dca36569.1
scaffold385	Augustus	exon	154409	154534	.	+	.	ID=Dca36569.1.exon2;Parent=Dca36569.1
scaffold385	Augustus	exon	155101	155205	.	+	.	ID=Dca36569.1.exon3;Parent=Dca36569.1
scaffold385	Augustus	exon	155296	155819	.	+	.	ID=Dca36569.1.exon4;Parent=Dca36569.1
scaffold385	Augustus	exon	155935	156013	.	+	.	ID=Dca36569.1.exon5;Parent=Dca36569.1