Dca36582.1
Annotation
- 2-exons
- f-1
- sp|Q2QP23_ORYSJ#Transposon protein, putative, CACTA, En/Spm sub-class, expressed#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os12g35940#unknown#0F0P0C
- Repeat List (scaffold3852)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca36582.1 |
1 |
427 |
507 |
38.26 |
427 |
42 |
3e-88
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q2QP23_ORYSJ |
621 |
1064 |
1114 |
39.85 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca36582.1 |
91 |
427 |
507 |
29.78 |
337 |
41 |
4e-64
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0544600-00 |
18 |
371 |
422 |
83.88 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3852 |
Augustus |
mRNA |
22937 |
24567 |
. |
+ |
. |
ID=Dca36582.1;Parent=Dca36582 |
| scaffold3852 |
Augustus |
exon |
22937 |
23637 |
. |
+ |
. |
ID=Dca36582.1.exon1;Parent=Dca36582.1 |
| scaffold3852 |
Augustus |
exon |
23745 |
24567 |
. |
+ |
. |
ID=Dca36582.1.exon2;Parent=Dca36582.1 |
