Dca36648.1
Annotation
- 3-exons
- f-1
- sp|D7SKF1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_06s0004g04780#GO:0005634;GO:0003677#1F0P1C
- sp|A9PAN4_POPTR#Methyl binding domain protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#Name=MBD905#GO:0005634;GO:0003677#1F0P1C
- Repeat List (scaffold3865)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca36648.1 |
70 |
213 |
218 |
32.11 |
144 |
49 |
3e-26
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D7SKF1_VITVI |
6 |
129 |
135 |
91.85 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca36648.1 |
17 |
216 |
218 |
30.73 |
200 |
32 |
1e-22
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G59380.1 |
11 |
222 |
225 |
94.22 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3865 |
Augus-PASA |
mRNA |
14856 |
17530 |
. |
- |
. |
ID=Dca36648.1;Parent=Dca36648 |
| scaffold3865 |
Augus-PASA |
exon |
14856 |
15095 |
. |
- |
. |
ID=Dca36648.1.exon1;Parent=Dca36648.1 |
| scaffold3865 |
Augus-PASA |
exon |
15226 |
15354 |
. |
- |
. |
ID=Dca36648.1.exon2;Parent=Dca36648.1 |
| scaffold3865 |
Augus-PASA |
exon |
17243 |
17530 |
. |
- |
. |
ID=Dca36648.1.exon3;Parent=Dca36648.1 |
