Carnation DB

Dca3670.1

Annotation

8-exons
f-1
sp|E0CVI1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_16s0098g00320#GO:0005634;GO:0003676;GO:0008270#2F0P1C
sp|B9RII3_RICCO#Splicing factor 3a, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1579390#GO:0005634;GO:0003676;GO:0008270#2F0P1C
Repeat List (scaffold1131)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3670.1	170	326	446	22.42	157	51	1e-43
Target_name	Start	End	Length	Cov(%)
sp\|E0CVI1_VITVI	209	406	509	38.89

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3670.1	141	326	446	22.64	186	45	1e-39
Target_name	Start	End	Length	Cov(%)
Os03t0717600-01	184	404	508	43.5

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1131	Augustus	mRNA	62832	69268	.	-	.	ID=Dca3670.1;Parent=Dca3670
scaffold1131	Augustus	exon	62832	62973	.	-	.	ID=Dca3670.1.exon1;Parent=Dca3670.1
scaffold1131	Augustus	exon	64429	64633	.	-	.	ID=Dca3670.1.exon2;Parent=Dca3670.1
scaffold1131	Augustus	exon	65581	65709	.	-	.	ID=Dca3670.1.exon3;Parent=Dca3670.1
scaffold1131	Augustus	exon	67183	67194	.	-	.	ID=Dca3670.1.exon4;Parent=Dca3670.1
scaffold1131	Augustus	exon	67540	67642	.	-	.	ID=Dca3670.1.exon5;Parent=Dca3670.1
scaffold1131	Augustus	exon	67933	68004	.	-	.	ID=Dca3670.1.exon6;Parent=Dca3670.1
scaffold1131	Augustus	exon	68517	68696	.	-	.	ID=Dca3670.1.exon7;Parent=Dca3670.1
scaffold1131	Augustus	exon	68771	69268	.	-	.	ID=Dca3670.1.exon8;Parent=Dca3670.1