Carnation DB

Dca36728.1

Annotation

5-exons
f-1
sp|F4NCG1_BETVU#Putative uncharacterized protein#Beta vulgaris subsp vulgaris#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
Os06t0484800-00 Reverse transcriptase domain containing protein.
Repeat List (scaffold388)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca36728.1	768	1444	1454	17.4	677	36	2e-131
Target_name	Start	End	Length	Cov(%)
sp\|F4NCG1_BETVU	236	946	1110	64.05

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca36728.1	771	1348	1454	12.31	578	31	7e-68
Target_name	Start	End	Length	Cov(%)
Os06t0484800-00	166	730	857	65.92

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold388	Augustus	mRNA	70852	76186	.	+	.	ID=Dca36728.1;Parent=Dca36728
scaffold388	Augustus	exon	70852	71241	.	+	.	ID=Dca36728.1.exon1;Parent=Dca36728.1
scaffold388	Augustus	exon	71335	72015	.	+	.	ID=Dca36728.1.exon2;Parent=Dca36728.1
scaffold388	Augustus	exon	72164	73393	.	+	.	ID=Dca36728.1.exon3;Parent=Dca36728.1
scaffold388	Augustus	exon	74018	75769	.	+	.	ID=Dca36728.1.exon4;Parent=Dca36728.1
scaffold388	Augustus	exon	75875	76186	.	+	.	ID=Dca36728.1.exon5;Parent=Dca36728.1