Carnation DB

Dca36870.1

Annotation

18-exons
f-1
sp|B9GXB9_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_553737#unknown#0F0P0C
AT1G79830.4 | Symbols: GC5 | golgin candidate 5 | chr1:30028110-30033508 REVERSE LENGTH=976
Repeat List (scaffold39)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca36870.1	23	702	702	74.07	680	77	0
Target_name	Start	End	Length	Cov(%)
sp\|B9GXB9_POPTR	296	975	975	69.74

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca36870.1	7	693	702	71.93	687	72	0
Target_name	Start	End	Length	Cov(%)
AT1G79830.4	283	976	976	71.1

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold39	Augustus	mRNA	258327	264502	.	+	.	ID=Dca36870.1;Parent=Dca36870
scaffold39	Augustus	exon	258327	258629	.	+	.	ID=Dca36870.1.exon1;Parent=Dca36870.1
scaffold39	Augustus	exon	258719	258790	.	+	.	ID=Dca36870.1.exon2;Parent=Dca36870.1
scaffold39	Augustus	exon	259324	259398	.	+	.	ID=Dca36870.1.exon3;Parent=Dca36870.1
scaffold39	Augustus	exon	259800	259914	.	+	.	ID=Dca36870.1.exon4;Parent=Dca36870.1
scaffold39	Augustus	exon	260271	260332	.	+	.	ID=Dca36870.1.exon5;Parent=Dca36870.1
scaffold39	Augustus	exon	260410	260457	.	+	.	ID=Dca36870.1.exon6;Parent=Dca36870.1
scaffold39	Augustus	exon	261184	261468	.	+	.	ID=Dca36870.1.exon7;Parent=Dca36870.1
scaffold39	Augustus	exon	261561	261620	.	+	.	ID=Dca36870.1.exon8;Parent=Dca36870.1
scaffold39	Augustus	exon	261701	261784	.	+	.	ID=Dca36870.1.exon9;Parent=Dca36870.1
scaffold39	Augus-PASA	exon	261882	261947	.	+	.	ID=Dca36870.1.exon10;Parent=Dca36870.1
scaffold39	Augus-PASA	exon	262121	262219	.	+	.	ID=Dca36870.1.exon11;Parent=Dca36870.1
scaffold39	Augus-PASA	exon	262369	262587	.	+	.	ID=Dca36870.1.exon12;Parent=Dca36870.1
scaffold39	Augus-PASA	exon	262697	262811	.	+	.	ID=Dca36870.1.exon13;Parent=Dca36870.1
scaffold39	Augus-PASA	exon	262892	263112	.	+	.	ID=Dca36870.1.exon14;Parent=Dca36870.1
scaffold39	Augus-PASA	exon	263710	263769	.	+	.	ID=Dca36870.1.exon15;Parent=Dca36870.1
scaffold39	Augus-PASA	exon	263846	263959	.	+	.	ID=Dca36870.1.exon16;Parent=Dca36870.1
scaffold39	Augus-PASA	exon	264307	264381	.	+	.	ID=Dca36870.1.exon17;Parent=Dca36870.1
scaffold39	Augus-PASA	exon	264467	264502	.	+	.	ID=Dca36870.1.exon18;Parent=Dca36870.1