Carnation DB

Dca37083.1

Annotation

9-exons
f-1
sp|B9GFM3_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_642311#unknown#0F0P0C
Os06t0634300-01 Similar to cDNA clone:J023074C15, full insert sequence.
Repeat List (scaffold393)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca37083.1	48	319	324	53.7	272	64	8e-100
Target_name	Start	End	Length	Cov(%)
sp\|B9GFM3_POPTR	17	289	294	92.85

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca37083.1	59	322	324	49.69	264	61	4e-95
Target_name	Start	End	Length	Cov(%)
Os06t0634300-01	95	359	375	70.66

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold393	Augus-PASA	mRNA	98440	102174	.	+	.	ID=Dca37083.1;Parent=Dca37083
scaffold393	Augus-PASA	exon	98440	98589	.	+	.	ID=Dca37083.1.exon1;Parent=Dca37083.1
scaffold393	Augus-PASA	exon	99025	99165	.	+	.	ID=Dca37083.1.exon2;Parent=Dca37083.1
scaffold393	Augus-PASA	exon	99254	99319	.	+	.	ID=Dca37083.1.exon3;Parent=Dca37083.1
scaffold393	Augus-PASA	exon	99829	99966	.	+	.	ID=Dca37083.1.exon4;Parent=Dca37083.1
scaffold393	Augus-PASA	exon	100244	100321	.	+	.	ID=Dca37083.1.exon5;Parent=Dca37083.1
scaffold393	Augus-PASA	exon	100408	100458	.	+	.	ID=Dca37083.1.exon6;Parent=Dca37083.1
scaffold393	Augus-PASA	exon	100551	100585	.	+	.	ID=Dca37083.1.exon7;Parent=Dca37083.1
scaffold393	Augus-PASA	exon	101120	101228	.	+	.	ID=Dca37083.1.exon8;Parent=Dca37083.1
scaffold393	Augustus	exon	101968	102174	.	+	.	ID=Dca37083.1.exon9;Parent=Dca37083.1