Dca37102.1
Annotation
- 3-exons
- f-1
- sp|Q9ZUF0_ARATH#Putative non-LTR retroelement reverse transcriptase#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g05980#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Repeat List (scaffold3932)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca37102.1 |
5 |
522 |
523 |
35.18 |
518 |
34 |
1e-86
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9ZUF0_ARATH |
370 |
923 |
1352 |
40.97 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca37102.1 |
223 |
522 |
523 |
20.26 |
300 |
35 |
3e-45
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0484800-00 |
372 |
674 |
857 |
35.35 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3932 |
Augustus |
mRNA |
16616 |
18526 |
. |
+ |
. |
ID=Dca37102.1;Parent=Dca37102 |
| scaffold3932 |
Augustus |
exon |
16616 |
17143 |
. |
+ |
. |
ID=Dca37102.1.exon1;Parent=Dca37102.1 |
| scaffold3932 |
Augustus |
exon |
17261 |
17404 |
. |
+ |
. |
ID=Dca37102.1.exon2;Parent=Dca37102.1 |
| scaffold3932 |
Augustus |
exon |
17627 |
18526 |
. |
+ |
. |
ID=Dca37102.1.exon3;Parent=Dca37102.1 |
