Dca37121.1
Annotation
- 4-exons
- f-1
- sp|Q9ZVF0_ARATH#Putative non-LTR retroelement reverse transcriptase#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g01550#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Repeat List (scaffold3939)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca37121.1 |
21 |
607 |
654 |
28.74 |
587 |
30 |
5e-81
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9ZVF0_ARATH |
580 |
1155 |
1449 |
39.75 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca37121.1 |
501 |
623 |
654 |
6.26 |
123 |
33 |
3e-10
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0484800-00 |
668 |
794 |
857 |
14.81 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3939 |
Augustus |
mRNA |
24669 |
27083 |
. |
- |
. |
ID=Dca37121.1;Parent=Dca37121 |
| scaffold3939 |
Augustus |
exon |
24669 |
25327 |
. |
- |
. |
ID=Dca37121.1.exon1;Parent=Dca37121.1 |
| scaffold3939 |
Augustus |
exon |
25565 |
26462 |
. |
- |
. |
ID=Dca37121.1.exon2;Parent=Dca37121.1 |
| scaffold3939 |
Augustus |
exon |
26583 |
26958 |
. |
- |
. |
ID=Dca37121.1.exon3;Parent=Dca37121.1 |
| scaffold3939 |
Augustus |
exon |
27052 |
27083 |
. |
- |
. |
ID=Dca37121.1.exon4;Parent=Dca37121.1 |
