Dca37147.1
Annotation
- 2-exons
- f-1
- sp|O81506_ARATH#Putative retrotransposon protein#Arabidopsis thaliana (Mouse-ear cress)#Name=T7M24.7#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold3940)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca37147.1 |
2 |
145 |
150 |
66.66 |
144 |
57 |
2e-53
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O81506_ARATH |
135 |
312 |
964 |
18.46 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca37147.1 |
2 |
144 |
150 |
43.33 |
143 |
37 |
1e-26
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
549 |
726 |
1428 |
12.46 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3940 |
Augustus |
mRNA |
1391 |
1945 |
. |
+ |
. |
ID=Dca37147.1;Parent=Dca37147 |
| scaffold3940 |
Augustus |
exon |
1391 |
1715 |
. |
+ |
. |
ID=Dca37147.1.exon1;Parent=Dca37147.1 |
| scaffold3940 |
Augustus |
exon |
1818 |
1945 |
. |
+ |
. |
ID=Dca37147.1.exon2;Parent=Dca37147.1 |
