Dca37226.1
Annotation
- 3-exons
- f-1
- sp|Q7G4E9_ORYSJ#Retrotransposon gag protein, putative#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os10g12160#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold3957)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca37226.1 |
46 |
819 |
916 |
37.44 |
774 |
43 |
1e-165
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q7G4E9_ORYSJ |
268 |
1029 |
1608 |
47.38 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca37226.1 |
373 |
912 |
916 |
21.17 |
540 |
33 |
3e-83
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0142900-02 |
55 |
637 |
707 |
82.46 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3957 |
Augustus |
mRNA |
29510 |
35170 |
. |
- |
. |
ID=Dca37226.1;Parent=Dca37226 |
| scaffold3957 |
Augustus |
exon |
29510 |
29804 |
. |
- |
. |
ID=Dca37226.1.exon1;Parent=Dca37226.1 |
| scaffold3957 |
Augustus |
exon |
31501 |
32240 |
. |
- |
. |
ID=Dca37226.1.exon2;Parent=Dca37226.1 |
| scaffold3957 |
Augustus |
exon |
33455 |
35170 |
. |
- |
. |
ID=Dca37226.1.exon3;Parent=Dca37226.1 |
