Carnation DB

Dca37424.1

Annotation

8-exons
f-1
sp|D7SPX8_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_14s0219g00170#GO:0003676;GO:0008270#2F0P0C
sp|G8A2H7_MEDTR#Zinc finger CCCH domain-containing protein#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_135s0022#GO:0003676;GO:0008270#2F0P0C
Repeat List (scaffold399)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca37424.1	105	494	511	31.5	390	42	4e-72
Target_name	Start	End	Length	Cov(%)
sp\|D7SPX8_VITVI	56	397	417	82.01

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca37424.1	103	185	511	5.87	83	36	7e-07
Target_name	Start	End	Length	Cov(%)
AT3G48440.1	341	419	448	17.63

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold399	Augus-PASA	mRNA	23020	27790	.	+	.	ID=Dca37424.1;Parent=Dca37424
scaffold399	Augus-PASA	exon	23020	23439	.	+	.	ID=Dca37424.1.exon1;Parent=Dca37424.1
scaffold399	Augus-PASA	exon	23742	23816	.	+	.	ID=Dca37424.1.exon2;Parent=Dca37424.1
scaffold399	Augus-PASA	exon	25237	25353	.	+	.	ID=Dca37424.1.exon3;Parent=Dca37424.1
scaffold399	Augus-PASA	exon	25484	25771	.	+	.	ID=Dca37424.1.exon4;Parent=Dca37424.1
scaffold399	Augustus	exon	26378	26463	.	+	.	ID=Dca37424.1.exon5;Parent=Dca37424.1
scaffold399	Augustus	exon	26557	26644	.	+	.	ID=Dca37424.1.exon6;Parent=Dca37424.1
scaffold399	Augus-PASA	exon	26953	27219	.	+	.	ID=Dca37424.1.exon7;Parent=Dca37424.1
scaffold399	Augus-PASA	exon	27596	27790	.	+	.	ID=Dca37424.1.exon8;Parent=Dca37424.1