Dca3745.1
Annotation
- 3-exons
- f-1
- sp|D3IVU0_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold11344)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3745.1 |
1 |
295 |
301 |
50.49 |
295 |
52 |
8e-79
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVU0_9POAL |
648 |
893 |
896 |
27.45 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3745.1 |
5 |
280 |
301 |
27.9 |
276 |
31 |
7e-25
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
1161 |
1378 |
1401 |
15.56 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold11344 |
Augustus |
mRNA |
2388 |
4557 |
. |
+ |
. |
ID=Dca3745.1;Parent=Dca3745 |
| scaffold11344 |
Augustus |
exon |
2388 |
2627 |
. |
+ |
. |
ID=Dca3745.1.exon1;Parent=Dca3745.1 |
| scaffold11344 |
Augustus |
exon |
3745 |
3940 |
. |
+ |
. |
ID=Dca3745.1.exon2;Parent=Dca3745.1 |
| scaffold11344 |
Augustus |
exon |
4088 |
4557 |
. |
+ |
. |
ID=Dca3745.1.exon3;Parent=Dca3745.1 |
