Carnation DB

Dca3748.1

Annotation

5-exons
f-1
sp|B9SIT8_RICCO#Gaba(A) receptor-associated protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0541040#GO:0004872#1F0P0C
Repeat List (scaffold11347)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3748.1	8	127	127	89.76	120	95	5e-60
Target_name	Start	End	Length	Cov(%)
sp\|B9SIT8_RICCO	1	120	122	98.36

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3748.1	8	124	127	84.25	117	92	4e-58
Target_name	Start	End	Length	Cov(%)
AT4G16520.1	1	117	121	96.69

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold11347	Augus-PASA	mRNA	6996	7762	.	-	.	ID=Dca3748.1;Parent=Dca3748
scaffold11347	Augus-PASA	exon	6996	7093	.	-	.	ID=Dca3748.1.exon1;Parent=Dca3748.1
scaffold11347	Augus-PASA	exon	7170	7288	.	-	.	ID=Dca3748.1.exon2;Parent=Dca3748.1
scaffold11347	Augus-PASA	exon	7379	7431	.	-	.	ID=Dca3748.1.exon3;Parent=Dca3748.1
scaffold11347	Augus-PASA	exon	7549	7604	.	-	.	ID=Dca3748.1.exon4;Parent=Dca3748.1
scaffold11347	Augustus	exon	7705	7762	.	-	.	ID=Dca3748.1.exon5;Parent=Dca3748.1