Dca37522.1
Annotation
- 3-exons
- f-1
- sp|F6HVG4_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_13s0139g00360#unknown#0F0P0C
- AT3G54500.3 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: dentin sialophosphoprotein-related (TAIR:AT5G64170.1). | chr3:20175792-20178482 REVERSE LENGTH=669
- Repeat List (scaffold4)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca37522.1 |
7 |
249 |
308 |
35.71 |
243 |
45 |
1e-45
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F6HVG4_VITVI |
386 |
630 |
698 |
35.1 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca37522.1 |
31 |
241 |
308 |
31.81 |
211 |
47 |
9e-37
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G54500.3 |
400 |
607 |
669 |
31.09 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4 |
Augustus |
mRNA |
291245 |
293383 |
. |
+ |
. |
ID=Dca37522.1;Parent=Dca37522 |
| scaffold4 |
Augustus |
exon |
291245 |
291676 |
. |
+ |
. |
ID=Dca37522.1.exon1;Parent=Dca37522.1 |
| scaffold4 |
Augustus |
exon |
291955 |
292109 |
. |
+ |
. |
ID=Dca37522.1.exon2;Parent=Dca37522.1 |
| scaffold4 |
Augustus |
exon |
293044 |
293383 |
. |
+ |
. |
ID=Dca37522.1.exon3;Parent=Dca37522.1 |
