Carnation DB

Dca37622.1

Annotation

10-exons
f-1
sp|D7TK39_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_10s0003g03190#GO:0005634;GO:0030529;GO:0000166;GO:0003723;GO:0006396#2F1P2C
AT5G46250.1 | Symbols: | RNA-binding protein | chr5:18755388-18758056 FORWARD LENGTH=422
Repeat List (scaffold40)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca37622.1	14	324	327	56.26	311	56	5e-91
Target_name	Start	End	Length	Cov(%)
sp\|D7TK39_VITVI	10	339	342	96.49

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca37622.1	38	322	327	49.84	285	53	4e-78
Target_name	Start	End	Length	Cov(%)
AT5G46250.1	101	410	422	73.45

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold40	Augus-PASA	mRNA	284217	286838	.	-	.	ID=Dca37622.1;Parent=Dca37622
scaffold40	Augus-PASA	exon	284217	284335	.	-	.	ID=Dca37622.1.exon1;Parent=Dca37622.1
scaffold40	Augus-PASA	exon	284425	284512	.	-	.	ID=Dca37622.1.exon2;Parent=Dca37622.1
scaffold40	Augus-PASA	exon	284915	285022	.	-	.	ID=Dca37622.1.exon3;Parent=Dca37622.1
scaffold40	Augus-PASA	exon	285107	285175	.	-	.	ID=Dca37622.1.exon4;Parent=Dca37622.1
scaffold40	Augus-PASA	exon	285266	285313	.	-	.	ID=Dca37622.1.exon5;Parent=Dca37622.1
scaffold40	Augus-PASA	exon	285419	285500	.	-	.	ID=Dca37622.1.exon6;Parent=Dca37622.1
scaffold40	Augus-PASA	exon	285620	285699	.	-	.	ID=Dca37622.1.exon7;Parent=Dca37622.1
scaffold40	Augus-PASA	exon	285775	285846	.	-	.	ID=Dca37622.1.exon8;Parent=Dca37622.1
scaffold40	Augus-PASA	exon	285939	286033	.	-	.	ID=Dca37622.1.exon9;Parent=Dca37622.1
scaffold40	Augus-PASA	exon	286616	286838	.	-	.	ID=Dca37622.1.exon10;Parent=Dca37622.1