Carnation DB

Dca37633.1

Annotation

12-exons
f-1
sp|B9GH10_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_550610#GO:0008442;GO:0051287;GO:0004616;GO:0006098;GO:0006573#3F2P0C
AT4G20930.1 | Symbols: | 6-phosphogluconate dehydrogenase family protein | chr4:11198627-11201036 REVERSE LENGTH=347
Repeat List (scaffold40)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca37633.1	166	232	546	9.15	67	75	9e-22
Target_name	Start	End	Length	Cov(%)
sp\|B9GH10_POPTR	40	106	347	19.3

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca37633.1	166	232	546	7.5	67	62	7e-18
Target_name	Start	End	Length	Cov(%)
AT4G20930.1	40	106	347	19.3

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold40	Augustus	mRNA	357417	365318	.	+	.	ID=Dca37633.1;Parent=Dca37633
scaffold40	Augustus	exon	357417	357908	.	+	.	ID=Dca37633.1.exon1;Parent=Dca37633.1
scaffold40	Augustus	exon	360249	360337	.	+	.	ID=Dca37633.1.exon2;Parent=Dca37633.1
scaffold40	Augustus	exon	360435	360549	.	+	.	ID=Dca37633.1.exon3;Parent=Dca37633.1
scaffold40	Augus-PASA	exon	362395	362483	.	+	.	ID=Dca37633.1.exon4;Parent=Dca37633.1
scaffold40	Augus-PASA	exon	362581	362695	.	+	.	ID=Dca37633.1.exon5;Parent=Dca37633.1
scaffold40	Augus-PASA	exon	362755	362905	.	+	.	ID=Dca37633.1.exon6;Parent=Dca37633.1
scaffold40	Augus-PASA	exon	363491	363573	.	+	.	ID=Dca37633.1.exon7;Parent=Dca37633.1
scaffold40	Augus-PASA	exon	363807	363902	.	+	.	ID=Dca37633.1.exon8;Parent=Dca37633.1
scaffold40	Augus-PASA	exon	364229	364371	.	+	.	ID=Dca37633.1.exon9;Parent=Dca37633.1
scaffold40	Augus-PASA	exon	364659	364743	.	+	.	ID=Dca37633.1.exon10;Parent=Dca37633.1
scaffold40	Augus-PASA	exon	364915	364994	.	+	.	ID=Dca37633.1.exon11;Parent=Dca37633.1
scaffold40	Augus-PASA	exon	365216	365318	.	+	.	ID=Dca37633.1.exon12;Parent=Dca37633.1