Carnation DB

Dca37984.1

Annotation

13-exons
f-1
sp|A9PK10_9ROSI#Putative uncharacterized protein#Populus trichocarpa x Populus deltoides#unknown#unknown#0F0P0C
AT3G01920.1 | Symbols: | DHBP synthase RibB-like alpha/beta domain | chr3:317449-319001 FORWARD LENGTH=307
Repeat List (scaffold405)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca37984.1	202	397	407	34.64	196	72	2e-82
Target_name	Start	End	Length	Cov(%)
sp\|A9PK10_9ROSI	108	303	313	62.61

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca37984.1	202	393	407	31.94	192	68	1e-77
Target_name	Start	End	Length	Cov(%)
AT3G01920.1	104	295	307	62.54

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold405	Augus-PASA	mRNA	46055	56304	.	+	.	ID=Dca37984.1;Parent=Dca37984
scaffold405	Augus-PASA	exon	46055	46150	.	+	.	ID=Dca37984.1.exon1;Parent=Dca37984.1
scaffold405	Augus-PASA	exon	46273	46351	.	+	.	ID=Dca37984.1.exon2;Parent=Dca37984.1
scaffold405	Augus-PASA	exon	47480	47649	.	+	.	ID=Dca37984.1.exon3;Parent=Dca37984.1
scaffold405	Augus-PASA	exon	47741	47788	.	+	.	ID=Dca37984.1.exon4;Parent=Dca37984.1
scaffold405	Augus-PASA	exon	48908	48982	.	+	.	ID=Dca37984.1.exon5;Parent=Dca37984.1
scaffold405	Augustus	exon	50280	50413	.	+	.	ID=Dca37984.1.exon6;Parent=Dca37984.1
scaffold405	Augustus	exon	53620	53673	.	+	.	ID=Dca37984.1.exon7;Parent=Dca37984.1
scaffold405	Augustus	exon	53757	53781	.	+	.	ID=Dca37984.1.exon8;Parent=Dca37984.1
scaffold405	Augustus	exon	53912	54034	.	+	.	ID=Dca37984.1.exon9;Parent=Dca37984.1
scaffold405	Augustus	exon	54440	54606	.	+	.	ID=Dca37984.1.exon10;Parent=Dca37984.1
scaffold405	Augustus	exon	54829	54898	.	+	.	ID=Dca37984.1.exon11;Parent=Dca37984.1
scaffold405	Augustus	exon	55029	55127	.	+	.	ID=Dca37984.1.exon12;Parent=Dca37984.1
scaffold405	Augustus	exon	56221	56304	.	+	.	ID=Dca37984.1.exon13;Parent=Dca37984.1