Carnation DB

Dca38176.1

Annotation

11-exons
f-1
sp|F6GSZ6_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_17s0000g00960#unknown#0F0P0C
sp|G7J3D6_MEDTR#Protein DEK#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_3g098990#unknown#0F0P0C
Repeat List (scaffold408)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38176.1	82	500	524	46.37	419	56	1e-103
Target_name	Start	End	Length	Cov(%)
sp\|F6GSZ6_VITVI	110	534	570	74.56

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38176.1	65	500	524	43.32	436	51	2e-96
Target_name	Start	End	Length	Cov(%)
AT3G48710.1	32	442	462	88.96

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold408	Augus-PASA	mRNA	147946	154397	.	-	.	ID=Dca38176.1;Parent=Dca38176
scaffold408	Augus-PASA	exon	147946	148100	.	-	.	ID=Dca38176.1.exon1;Parent=Dca38176.1
scaffold408	Augus-PASA	exon	148572	148602	.	-	.	ID=Dca38176.1.exon2;Parent=Dca38176.1
scaffold408	Augus-PASA	exon	148682	148779	.	-	.	ID=Dca38176.1.exon3;Parent=Dca38176.1
scaffold408	Augus-PASA	exon	149149	149632	.	-	.	ID=Dca38176.1.exon4;Parent=Dca38176.1
scaffold408	Augus-PASA	exon	150913	150990	.	-	.	ID=Dca38176.1.exon5;Parent=Dca38176.1
scaffold408	Augus-PASA	exon	151097	151177	.	-	.	ID=Dca38176.1.exon6;Parent=Dca38176.1
scaffold408	Augus-PASA	exon	151262	151372	.	-	.	ID=Dca38176.1.exon7;Parent=Dca38176.1
scaffold408	Augus-PASA	exon	152613	152672	.	-	.	ID=Dca38176.1.exon8;Parent=Dca38176.1
scaffold408	Augus-PASA	exon	152781	152860	.	-	.	ID=Dca38176.1.exon9;Parent=Dca38176.1
scaffold408	Augus-PASA	exon	153897	153930	.	-	.	ID=Dca38176.1.exon10;Parent=Dca38176.1
scaffold408	Augus-PASA	exon	154035	154397	.	-	.	ID=Dca38176.1.exon11;Parent=Dca38176.1