Carnation DB

Dca38179.1

Annotation

6-exons
f-1
sp|A9PFS0_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_1108163#GO:0003824#1F0P0C
sp|A6NA79_MEDTR#Protein phosphatase 2c#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_7g080170#GO:0003824#1F0P0C
Repeat List (scaffold4080)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38179.1	79	235	289	38.75	157	72	4e-64
Target_name	Start	End	Length	Cov(%)
sp\|A9PFS0_POPTR	160	316	493	31.84

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38179.1	85	233	289	32.52	149	64	7e-57
Target_name	Start	End	Length	Cov(%)
Os08t0500300-01	184	332	532	28

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4080	Augustus	mRNA	17156	19447	.	+	.	ID=Dca38179.1;Parent=Dca38179
scaffold4080	Augustus	exon	17156	17384	.	+	.	ID=Dca38179.1.exon1;Parent=Dca38179.1
scaffold4080	Augustus	exon	17455	17627	.	+	.	ID=Dca38179.1.exon2;Parent=Dca38179.1
scaffold4080	Augustus	exon	17750	17867	.	+	.	ID=Dca38179.1.exon3;Parent=Dca38179.1
scaffold4080	Augustus	exon	18007	18185	.	+	.	ID=Dca38179.1.exon4;Parent=Dca38179.1
scaffold4080	Augustus	exon	18667	18738	.	+	.	ID=Dca38179.1.exon5;Parent=Dca38179.1
scaffold4080	Augustus	exon	19349	19447	.	+	.	ID=Dca38179.1.exon6;Parent=Dca38179.1