Carnation DB

Dca38233.1

Annotation

7-exons
f-1
sp|F6HLC5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0007g00360#GO:0005634;GO:0003677;GO:0006355#1F1P1C
sp|B9T258_RICCO#Myb3r3, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0915890#GO:0005634;GO:0003677;GO:0006355#1F1P1C
Repeat List (scaffold4090)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38233.1	3	526	527	59.96	524	58	3e-162
Target_name	Start	End	Length	Cov(%)
sp\|F6HLC5_VITVI	7	548	558	97.13

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38233.1	5	506	527	49.52	502	51	1e-121
Target_name	Start	End	Length	Cov(%)
AT5G02320.1	23	518	548	90.51

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4090	Augustus	mRNA	29620	36478	.	-	.	ID=Dca38233.1;Parent=Dca38233
scaffold4090	Augustus	exon	29620	30619	.	-	.	ID=Dca38233.1.exon1;Parent=Dca38233.1
scaffold4090	Augustus	exon	31306	31434	.	-	.	ID=Dca38233.1.exon2;Parent=Dca38233.1
scaffold4090	Augustus	exon	31619	31722	.	-	.	ID=Dca38233.1.exon3;Parent=Dca38233.1
scaffold4090	Augustus	exon	31820	31914	.	-	.	ID=Dca38233.1.exon4;Parent=Dca38233.1
scaffold4090	Augustus	exon	33854	33911	.	-	.	ID=Dca38233.1.exon5;Parent=Dca38233.1
scaffold4090	Augustus	exon	34375	34426	.	-	.	ID=Dca38233.1.exon6;Parent=Dca38233.1
scaffold4090	Augustus	exon	36333	36478	.	-	.	ID=Dca38233.1.exon7;Parent=Dca38233.1