Carnation DB

Dca38511.1

Annotation

7-exons
f-1
sp|D7KG75_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_470711#GO:0016021#0F0P1C
AT1G06890.1 | Symbols: | nodulin MtN21 /EamA-like transporter family protein | chr1:2111728-2114038 REVERSE LENGTH=357
Repeat List (scaffold4128)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38511.1	4	327	329	80.54	324	82	3e-142
Target_name	Start	End	Length	Cov(%)
sp\|D7KG75_ARALL	8	332	357	91.03

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38511.1	4	327	329	80.54	324	82	3e-143
Target_name	Start	End	Length	Cov(%)
AT1G06890.1	8	332	357	91.03

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4128	Augus-PASA	mRNA	17744	21255	.	-	.	ID=Dca38511.1;Parent=Dca38511
scaffold4128	Augus-PASA	exon	17744	17806	.	-	.	ID=Dca38511.1.exon1;Parent=Dca38511.1
scaffold4128	Augus-PASA	exon	18249	18518	.	-	.	ID=Dca38511.1.exon2;Parent=Dca38511.1
scaffold4128	Augus-PASA	exon	18604	18765	.	-	.	ID=Dca38511.1.exon3;Parent=Dca38511.1
scaffold4128	Augus-PASA	exon	19241	19373	.	-	.	ID=Dca38511.1.exon4;Parent=Dca38511.1
scaffold4128	Augus-PASA	exon	19967	20034	.	-	.	ID=Dca38511.1.exon5;Parent=Dca38511.1
scaffold4128	Augus-PASA	exon	20161	20345	.	-	.	ID=Dca38511.1.exon6;Parent=Dca38511.1
scaffold4128	Augustus	exon	21147	21255	.	-	.	ID=Dca38511.1.exon7;Parent=Dca38511.1