Carnation DB

Dca38533.1

Annotation

7-exons
f-1
sp|F5CLC5_CATRO#Hydroxymethylglutaryl-CoA synthase#Catharanthus roseus (Madagascar periwinkle) (Vinca rosea)#unknown#GO:0004421;GO:0008299#1F1P0C
Repeat List (scaffold413)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38533.1	210	361	370	35.13	152	86	5e-75
Target_name	Start	End	Length	Cov(%)
sp\|F5CLC5_CATRO	57	208	463	32.82

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38533.1	210	361	370	33.78	152	83	5e-73
Target_name	Start	End	Length	Cov(%)
AT4G11820.2	54	205	461	32.97

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold413	Augustus	mRNA	121980	126874	.	+	.	ID=Dca38533.1;Parent=Dca38533
scaffold413	Augustus	exon	121980	122185	.	+	.	ID=Dca38533.1.exon1;Parent=Dca38533.1
scaffold413	Augustus	exon	123355	123475	.	+	.	ID=Dca38533.1.exon2;Parent=Dca38533.1
scaffold413	Augustus	exon	124722	125032	.	+	.	ID=Dca38533.1.exon3;Parent=Dca38533.1
scaffold413	Augustus	exon	125768	125900	.	+	.	ID=Dca38533.1.exon4;Parent=Dca38533.1
scaffold413	Augustus	exon	125988	126131	.	+	.	ID=Dca38533.1.exon5;Parent=Dca38533.1
scaffold413	Augustus	exon	126230	126388	.	+	.	ID=Dca38533.1.exon6;Parent=Dca38533.1
scaffold413	Augustus	exon	126836	126874	.	+	.	ID=Dca38533.1.exon7;Parent=Dca38533.1