Carnation DB

Dca38538.1

Annotation

8-exons
f-1
sp|D7U4M5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_03s0038g04350#GO:0005737;GO:0005524;GO:0017111;GO:0030163#2F1P1C
AT5G43010.1 | Symbols: RPT4A | regulatory particle triple-A ATPase 4A | chr5:17248563-17251014 REVERSE LENGTH=399
Repeat List (scaffold413)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38538.1	367	613	620	37.25	247	94	1e-133
Target_name	Start	End	Length	Cov(%)
sp\|D7U4M5_VITVI	17	263	399	61.9

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38538.1	366	613	620	37.41	248	94	8e-135
Target_name	Start	End	Length	Cov(%)
AT5G43010.1	16	263	399	62.15

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold413	Augustus	mRNA	141538	145786	.	-	.	ID=Dca38538.1;Parent=Dca38538
scaffold413	Augustus	exon	141538	141654	.	-	.	ID=Dca38538.1.exon1;Parent=Dca38538.1
scaffold413	Augustus	exon	141737	141823	.	-	.	ID=Dca38538.1.exon2;Parent=Dca38538.1
scaffold413	Augustus	exon	141910	141996	.	-	.	ID=Dca38538.1.exon3;Parent=Dca38538.1
scaffold413	Augustus	exon	142117	142278	.	-	.	ID=Dca38538.1.exon4;Parent=Dca38538.1
scaffold413	Augustus	exon	142560	142696	.	-	.	ID=Dca38538.1.exon5;Parent=Dca38538.1
scaffold413	Augustus	exon	142957	143076	.	-	.	ID=Dca38538.1.exon6;Parent=Dca38538.1
scaffold413	Augustus	exon	144145	144202	.	-	.	ID=Dca38538.1.exon7;Parent=Dca38538.1
scaffold413	Augustus	exon	144692	145786	.	-	.	ID=Dca38538.1.exon8;Parent=Dca38538.1