Dca38577.1
Annotation
- 3-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- sp|Q2AA50_ASPOF#Retrotransposon gag protein#Asparagus officinalis (Garden asparagus)#ORFNames=19.t00014#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold4135)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca38577.1 |
80 |
468 |
477 |
37.1 |
389 |
41 |
4e-65
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
228 |
656 |
1717 |
24.98 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca38577.1 |
314 |
406 |
477 |
6.7 |
93 |
35 |
1e-10
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0292200-01 |
98 |
189 |
192 |
47.91 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4135 |
Augustus |
mRNA |
25719 |
28236 |
. |
+ |
. |
ID=Dca38577.1;Parent=Dca38577 |
| scaffold4135 |
Augustus |
exon |
25719 |
25975 |
. |
+ |
. |
ID=Dca38577.1.exon1;Parent=Dca38577.1 |
| scaffold4135 |
Augustus |
exon |
27001 |
27539 |
. |
+ |
. |
ID=Dca38577.1.exon2;Parent=Dca38577.1 |
| scaffold4135 |
Augustus |
exon |
27599 |
28236 |
. |
+ |
. |
ID=Dca38577.1.exon3;Parent=Dca38577.1 |
