Carnation DB

Dca38617.1

Annotation

23-exons
f-1
sp|F6HLJ9_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0007g06370#GO:0005524;GO:0003677;GO:0004386;GO:0006355#3F1P0C
Os02t0689800-01 Similar to DEAD/DEAH box helicase domain-containing protein PIE1.
Repeat List (scaffold414)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38617.1	80	234	2178	5.41	155	77	9e-61
Target_name	Start	End	Length	Cov(%)
sp\|F6HLJ9_VITVI	21	173	2052	7.45

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38617.1	1087	2178	2178	26.62	1092	52	0
Target_name	Start	End	Length	Cov(%)
Os02t0689800-01	10	1066	1067	99.06

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold414	Augustus	mRNA	132688	147637	.	-	.	ID=Dca38617.1;Parent=Dca38617
scaffold414	Augustus	exon	132688	133123	.	-	.	ID=Dca38617.1.exon1;Parent=Dca38617.1
scaffold414	Augustus	exon	133627	134150	.	-	.	ID=Dca38617.1.exon2;Parent=Dca38617.1
scaffold414	Augustus	exon	134891	135680	.	-	.	ID=Dca38617.1.exon3;Parent=Dca38617.1
scaffold414	Augustus	exon	135769	135836	.	-	.	ID=Dca38617.1.exon4;Parent=Dca38617.1
scaffold414	Augustus	exon	135923	135987	.	-	.	ID=Dca38617.1.exon5;Parent=Dca38617.1
scaffold414	Augustus	exon	136755	139821	.	-	.	ID=Dca38617.1.exon6;Parent=Dca38617.1
scaffold414	Augustus	exon	139906	139968	.	-	.	ID=Dca38617.1.exon7;Parent=Dca38617.1
scaffold414	Augustus	exon	140074	140142	.	-	.	ID=Dca38617.1.exon8;Parent=Dca38617.1
scaffold414	Augustus	exon	140730	140768	.	-	.	ID=Dca38617.1.exon9;Parent=Dca38617.1
scaffold414	Augustus	exon	141115	141246	.	-	.	ID=Dca38617.1.exon10;Parent=Dca38617.1
scaffold414	Augustus	exon	141335	141393	.	-	.	ID=Dca38617.1.exon11;Parent=Dca38617.1
scaffold414	Augustus	exon	141528	141608	.	-	.	ID=Dca38617.1.exon12;Parent=Dca38617.1
scaffold414	Augustus	exon	141740	141875	.	-	.	ID=Dca38617.1.exon13;Parent=Dca38617.1
scaffold414	Augustus	exon	143154	143233	.	-	.	ID=Dca38617.1.exon14;Parent=Dca38617.1
scaffold414	Augustus	exon	143330	143518	.	-	.	ID=Dca38617.1.exon15;Parent=Dca38617.1
scaffold414	Augustus	exon	143614	143750	.	-	.	ID=Dca38617.1.exon16;Parent=Dca38617.1
scaffold414	Augustus	exon	143882	143970	.	-	.	ID=Dca38617.1.exon17;Parent=Dca38617.1
scaffold414	Augustus	exon	144055	144141	.	-	.	ID=Dca38617.1.exon18;Parent=Dca38617.1
scaffold414	Augustus	exon	144653	144760	.	-	.	ID=Dca38617.1.exon19;Parent=Dca38617.1
scaffold414	Augustus	exon	144850	144930	.	-	.	ID=Dca38617.1.exon20;Parent=Dca38617.1
scaffold414	Augustus	exon	145810	145888	.	-	.	ID=Dca38617.1.exon21;Parent=Dca38617.1
scaffold414	Augustus	exon	146717	146811	.	-	.	ID=Dca38617.1.exon22;Parent=Dca38617.1
scaffold414	Augustus	exon	147575	147637	.	-	.	ID=Dca38617.1.exon23;Parent=Dca38617.1