Dca38628.1
Annotation
- 4-exons
- f-1
- sp|A5CA12_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_040705#GO:0003676;GO:0004523#2F0P0C
- Os08t0177800-00 Similar to RNase H domain-containing protein.
- Repeat List (scaffold4141)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca38628.1 |
118 |
301 |
833 |
9.24 |
184 |
42 |
1e-34
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5CA12_VITVI |
88 |
270 |
1187 |
15.41 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca38628.1 |
666 |
781 |
833 |
5.64 |
116 |
40 |
3e-13
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os10t0458700-01 |
185 |
301 |
323 |
36.22 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4141 |
Augustus |
mRNA |
19005 |
22333 |
. |
- |
. |
ID=Dca38628.1;Parent=Dca38628 |
| scaffold4141 |
Augustus |
exon |
19005 |
19649 |
. |
- |
. |
ID=Dca38628.1.exon1;Parent=Dca38628.1 |
| scaffold4141 |
Augustus |
exon |
19768 |
20047 |
. |
- |
. |
ID=Dca38628.1.exon2;Parent=Dca38628.1 |
| scaffold4141 |
Augustus |
exon |
20339 |
21845 |
. |
- |
. |
ID=Dca38628.1.exon3;Parent=Dca38628.1 |
| scaffold4141 |
Augustus |
exon |
22264 |
22333 |
. |
- |
. |
ID=Dca38628.1.exon4;Parent=Dca38628.1 |
