Carnation DB

Dca38641.1

Annotation

6-exons
f-1
sp|A5BQ62_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_040310#GO:0003676;GO:0015074#1F1P0C
sp|O65452_ARATH#LTR retrotransposon like protein#Arabidopsis thaliana (Mouse-ear cress)#Name=AT4g22040#GO:0003676;GO:0015074#1F1P0C
Repeat List (scaffold4144)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38641.1	113	675	676	37.86	563	46	1e-129
Target_name	Start	End	Length	Cov(%)
sp\|A5BQ62_VITVI	672	1162	1461	33.6

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38641.1	511	676	676	12.42	166	50	1e-42
Target_name	Start	End	Length	Cov(%)
AT4G23160.1	132	302	1262	13.54

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4144	Augustus	mRNA	12804	15913	.	+	.	ID=Dca38641.1;Parent=Dca38641
scaffold4144	Augustus	exon	12804	12896	.	+	.	ID=Dca38641.1.exon1;Parent=Dca38641.1
scaffold4144	Augustus	exon	13398	14111	.	+	.	ID=Dca38641.1.exon2;Parent=Dca38641.1
scaffold4144	Augustus	exon	14332	14803	.	+	.	ID=Dca38641.1.exon3;Parent=Dca38641.1
scaffold4144	Augustus	exon	15013	15183	.	+	.	ID=Dca38641.1.exon4;Parent=Dca38641.1
scaffold4144	Augustus	exon	15256	15310	.	+	.	ID=Dca38641.1.exon5;Parent=Dca38641.1
scaffold4144	Augustus	exon	15388	15913	.	+	.	ID=Dca38641.1.exon6;Parent=Dca38641.1