Carnation DB

Dca38688.1

Annotation

5-exons
f-1
sp|B9RVX4_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_1173780#GO:0004144#1F0P0C
Os01t0681000-01 Uncharacterised protein family UPF0089 domain containing protein.
Repeat List (scaffold4156)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38688.1	10	471	479	62.21	462	65	3e-176
Target_name	Start	End	Length	Cov(%)
sp\|B9RVX4_RICCO	12	473	483	95.65

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38688.1	20	477	479	31.52	458	31	4e-55
Target_name	Start	End	Length	Cov(%)
Os01t0681000-01	48	524	532	89.66

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4156	Augustus	mRNA	1531	5221	.	+	.	ID=Dca38688.1;Parent=Dca38688
scaffold4156	Augustus	exon	1531	1749	.	+	.	ID=Dca38688.1.exon1;Parent=Dca38688.1
scaffold4156	Augustus	exon	1942	2517	.	+	.	ID=Dca38688.1.exon2;Parent=Dca38688.1
scaffold4156	Augustus	exon	3017	3370	.	+	.	ID=Dca38688.1.exon3;Parent=Dca38688.1
scaffold4156	Augus-PASA	exon	3498	3635	.	+	.	ID=Dca38688.1.exon4;Parent=Dca38688.1
scaffold4156	Augus-PASA	exon	5069	5221	.	+	.	ID=Dca38688.1.exon5;Parent=Dca38688.1