Carnation DB

Dca3875.1

Annotation

7-exons
f-1
sp|B9RQS0_RICCO#Carboxy-lyase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0706020#GO:0016829#1F0P0C
Repeat List (scaffold114)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3875.1	1	213	213	77.46	213	78	2e-97
Target_name	Start	End	Length	Cov(%)
sp\|B9RQS0_RICCO	1	213	217	98.15

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3875.1	9	213	213	74.17	205	78	4e-94
Target_name	Start	End	Length	Cov(%)
AT5G11950.1	7	211	216	94.9

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold114	Augus-PASA	mRNA	40089	42616	.	+	.	ID=Dca3875.1;Parent=Dca3875
scaffold114	Augus-PASA	exon	40089	40205	.	+	.	ID=Dca3875.1.exon1;Parent=Dca3875.1
scaffold114	Augus-PASA	exon	41143	41240	.	+	.	ID=Dca3875.1.exon2;Parent=Dca3875.1
scaffold114	Augus-PASA	exon	41357	41387	.	+	.	ID=Dca3875.1.exon3;Parent=Dca3875.1
scaffold114	Augus-PASA	exon	41620	41719	.	+	.	ID=Dca3875.1.exon4;Parent=Dca3875.1
scaffold114	Augus-PASA	exon	41810	41880	.	+	.	ID=Dca3875.1.exon5;Parent=Dca3875.1
scaffold114	Augus-PASA	exon	41984	42127	.	+	.	ID=Dca3875.1.exon6;Parent=Dca3875.1
scaffold114	Augus-PASA	exon	42536	42616	.	+	.	ID=Dca3875.1.exon7;Parent=Dca3875.1