Carnation DB

Dca38776.1

Annotation

11-exons
f-1
sp|F6GZN3_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_18s0001g09310#GO:0005669;GO:0003677;GO:0006352#1F1P1C
sp|B9R722_RICCO#Transcription initiation factor, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1588000#GO:0005669;GO:0003677;GO:0003743;GO:0006352#2F1P1C
Repeat List (scaffold417)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38776.1	100	545	546	47.06	446	55	6e-118
Target_name	Start	End	Length	Cov(%)
sp\|F6GZN3_VITVI	459	925	926	50.43

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38776.1	22	535	546	45.6	514	44	2e-101
Target_name	Start	End	Length	Cov(%)
AT5G43130.2	307	850	852	63.84

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold417	Augustus	mRNA	134808	140382	.	-	.	ID=Dca38776.1;Parent=Dca38776
scaffold417	Augustus	exon	134808	134980	.	-	.	ID=Dca38776.1.exon1;Parent=Dca38776.1
scaffold417	Augustus	exon	135872	136097	.	-	.	ID=Dca38776.1.exon2;Parent=Dca38776.1
scaffold417	Augustus	exon	137715	137783	.	-	.	ID=Dca38776.1.exon3;Parent=Dca38776.1
scaffold417	Augustus	exon	137916	138056	.	-	.	ID=Dca38776.1.exon4;Parent=Dca38776.1
scaffold417	Augustus	exon	138139	138195	.	-	.	ID=Dca38776.1.exon5;Parent=Dca38776.1
scaffold417	Augustus	exon	138277	138332	.	-	.	ID=Dca38776.1.exon6;Parent=Dca38776.1
scaffold417	Augustus	exon	138443	138578	.	-	.	ID=Dca38776.1.exon7;Parent=Dca38776.1
scaffold417	Augustus	exon	138677	138764	.	-	.	ID=Dca38776.1.exon8;Parent=Dca38776.1
scaffold417	Augustus	exon	138858	138988	.	-	.	ID=Dca38776.1.exon9;Parent=Dca38776.1
scaffold417	Augustus	exon	139721	140224	.	-	.	ID=Dca38776.1.exon10;Parent=Dca38776.1
scaffold417	Augustus	exon	140323	140382	.	-	.	ID=Dca38776.1.exon11;Parent=Dca38776.1