Carnation DB

Dca3881.1

Annotation

5-exons
f-1
sp|D7M4F8_ARALL#Mechanosensitive ion channel domain-containing protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_488052#GO:0016020;GO:0055085#0F1P1C
Repeat List (scaffold114)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3881.1	33	710	716	50.41	678	53	0
Target_name	Start	End	Length	Cov(%)
sp\|D7M4F8_ARALL	46	729	732	93.44

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3881.1	33	710	716	49.72	678	52	0
Target_name	Start	End	Length	Cov(%)
AT5G12080.1	48	731	734	93.18

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold114	Augustus	mRNA	78911	82781	.	+	.	ID=Dca3881.1;Parent=Dca3881
scaffold114	Augustus	exon	78911	80193	.	+	.	ID=Dca3881.1.exon1;Parent=Dca3881.1
scaffold114	Augustus	exon	80292	80412	.	+	.	ID=Dca3881.1.exon2;Parent=Dca3881.1
scaffold114	Augustus	exon	81310	81603	.	+	.	ID=Dca3881.1.exon3;Parent=Dca3881.1
scaffold114	Augustus	exon	81706	81908	.	+	.	ID=Dca3881.1.exon4;Parent=Dca3881.1
scaffold114	Augustus	exon	82532	82781	.	+	.	ID=Dca3881.1.exon5;Parent=Dca3881.1