Dca38846.1
Annotation
- 3-exons
- f-1
- sp|D3IVU0_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold4183)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca38846.1 |
1 |
236 |
423 |
17.73 |
236 |
31 |
2e-14
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVU0_9POAL |
334 |
526 |
896 |
21.54 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca38846.1 |
3 |
109 |
423 |
9.69 |
107 |
38 |
4e-12
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
653 |
762 |
1401 |
7.85 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4183 |
Augustus |
mRNA |
3355 |
5799 |
. |
- |
. |
ID=Dca38846.1;Parent=Dca38846 |
| scaffold4183 |
Augustus |
exon |
3355 |
3824 |
. |
- |
. |
ID=Dca38846.1.exon1;Parent=Dca38846.1 |
| scaffold4183 |
Augustus |
exon |
3936 |
4179 |
. |
- |
. |
ID=Dca38846.1.exon2;Parent=Dca38846.1 |
| scaffold4183 |
Augustus |
exon |
5242 |
5799 |
. |
- |
. |
ID=Dca38846.1.exon3;Parent=Dca38846.1 |
