Dca38876.1
Annotation
- 4-exons
- f-1
- sp|B9GIU8_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_752064#unknown#0F0P0C
- Repeat List (scaffold419)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca38876.1 |
78 |
491 |
596 |
24.66 |
414 |
35 |
6e-45
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9GIU8_POPTR |
221 |
607 |
1462 |
26.47 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca38876.1 |
84 |
240 |
596 |
10.73 |
157 |
38 |
2e-22
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G17910.1 |
355 |
504 |
1342 |
11.17 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold419 |
Augustus |
mRNA |
11259 |
13784 |
. |
+ |
. |
ID=Dca38876.1;Parent=Dca38876 |
| scaffold419 |
Augustus |
exon |
11259 |
11988 |
. |
+ |
. |
ID=Dca38876.1.exon1;Parent=Dca38876.1 |
| scaffold419 |
Augustus |
exon |
12148 |
12189 |
. |
+ |
. |
ID=Dca38876.1.exon2;Parent=Dca38876.1 |
| scaffold419 |
Augustus |
exon |
12593 |
13384 |
. |
+ |
. |
ID=Dca38876.1.exon3;Parent=Dca38876.1 |
| scaffold419 |
Augustus |
exon |
13558 |
13784 |
. |
+ |
. |
ID=Dca38876.1.exon4;Parent=Dca38876.1 |
