Carnation DB

Dca38880.1

Annotation

9-exons
f-1
sp|D7SK40_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_06s0004g05940#GO:0016021;GO:0031966;GO:0006839#0F1P2C
AT5G58970.1 | Symbols: ATUCP2, UCP2 | uncoupling protein 2 | chr5:23808642-23811018 REVERSE LENGTH=305
Repeat List (scaffold419)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38880.1	1	301	302	78.14	301	79	9e-136
Target_name	Start	End	Length	Cov(%)
sp\|D7SK40_VITVI	1	298	302	98.67

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38880.1	1	300	302	73.5	300	74	6e-129
Target_name	Start	End	Length	Cov(%)
AT5G58970.1	1	298	305	97.7

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold419	Augus-PASA	mRNA	46462	50966	.	-	.	ID=Dca38880.1;Parent=Dca38880
scaffold419	Augus-PASA	exon	46462	46485	.	-	.	ID=Dca38880.1.exon1;Parent=Dca38880.1
scaffold419	Augus-PASA	exon	47468	47554	.	-	.	ID=Dca38880.1.exon2;Parent=Dca38880.1
scaffold419	Augus-PASA	exon	47663	47737	.	-	.	ID=Dca38880.1.exon3;Parent=Dca38880.1
scaffold419	Augus-PASA	exon	48962	49066	.	-	.	ID=Dca38880.1.exon4;Parent=Dca38880.1
scaffold419	Augus-PASA	exon	49144	49242	.	-	.	ID=Dca38880.1.exon5;Parent=Dca38880.1
scaffold419	Augus-PASA	exon	49339	49472	.	-	.	ID=Dca38880.1.exon6;Parent=Dca38880.1
scaffold419	Augus-PASA	exon	49618	49696	.	-	.	ID=Dca38880.1.exon7;Parent=Dca38880.1
scaffold419	Augus-PASA	exon	49870	50094	.	-	.	ID=Dca38880.1.exon8;Parent=Dca38880.1
scaffold419	Augus-PASA	exon	50886	50966	.	-	.	ID=Dca38880.1.exon9;Parent=Dca38880.1