Carnation DB

Dca38888.1

Annotation

16-exons
f-1
sp|B9HPB8_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_879030#GO:0042802;GO:0004252;GO:0043086;GO:0006508#2F2P0C
AT5G59100.1 | Symbols: | Subtilisin-like serine endopeptidase family protein | chr5:23858951-23862087 REVERSE LENGTH=741
Repeat List (scaffold419)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38888.1	1065	1208	1209	7.11	144	60	3e-45
Target_name	Start	End	Length	Cov(%)
sp\|B9HPB8_POPTR	5	148	710	20.28

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38888.1	1067	1208	1209	6.12	142	51	3e-37
Target_name	Start	End	Length	Cov(%)
AT5G59100.1	35	179	741	19.56

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold419	Augustus	mRNA	95461	103477	.	-	.	ID=Dca38888.1;Parent=Dca38888
scaffold419	Augustus	exon	95461	95806	.	-	.	ID=Dca38888.1.exon1;Parent=Dca38888.1
scaffold419	Augustus	exon	95927	96015	.	-	.	ID=Dca38888.1.exon2;Parent=Dca38888.1
scaffold419	Augustus	exon	96798	97045	.	-	.	ID=Dca38888.1.exon3;Parent=Dca38888.1
scaffold419	Augustus	exon	97133	97311	.	-	.	ID=Dca38888.1.exon4;Parent=Dca38888.1
scaffold419	Augustus	exon	97435	97554	.	-	.	ID=Dca38888.1.exon5;Parent=Dca38888.1
scaffold419	Augustus	exon	97642	97857	.	-	.	ID=Dca38888.1.exon6;Parent=Dca38888.1
scaffold419	Augustus	exon	97956	98047	.	-	.	ID=Dca38888.1.exon7;Parent=Dca38888.1
scaffold419	Augustus	exon	98304	98782	.	-	.	ID=Dca38888.1.exon8;Parent=Dca38888.1
scaffold419	Augustus	exon	100367	100873	.	-	.	ID=Dca38888.1.exon9;Parent=Dca38888.1
scaffold419	Augustus	exon	101179	101392	.	-	.	ID=Dca38888.1.exon10;Parent=Dca38888.1
scaffold419	Augustus	exon	101501	101612	.	-	.	ID=Dca38888.1.exon11;Parent=Dca38888.1
scaffold419	Augustus	exon	101699	101854	.	-	.	ID=Dca38888.1.exon12;Parent=Dca38888.1
scaffold419	Augustus	exon	102059	102156	.	-	.	ID=Dca38888.1.exon13;Parent=Dca38888.1
scaffold419	Augustus	exon	102304	102787	.	-	.	ID=Dca38888.1.exon14;Parent=Dca38888.1
scaffold419	Augustus	exon	102960	103172	.	-	.	ID=Dca38888.1.exon15;Parent=Dca38888.1
scaffold419	Augustus	exon	103401	103477	.	-	.	ID=Dca38888.1.exon16;Parent=Dca38888.1