Dca38889.1
Annotation
- 3-exons
- f-1
- sp|B9HPC0_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_1088295#GO:0006511#0F1P0C
- sp|B9S3C4_RICCO#Transcription elongation factor B polypeptide, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0732490#GO:0003746;GO:0006511#1F1P0C
- Repeat List (scaffold419)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca38889.1 |
1 |
74 |
74 |
93.24 |
74 |
94 |
1e-34
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9HPC0_POPTR |
25 |
98 |
98 |
75.51 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca38889.1 |
1 |
74 |
74 |
86.48 |
74 |
87 |
1e-33
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G59140.1 |
23 |
96 |
96 |
77.08 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold419 |
Augustus |
mRNA |
105038 |
106471 |
. |
- |
. |
ID=Dca38889.1;Parent=Dca38889 |
| scaffold419 |
Augustus |
exon |
105038 |
105116 |
. |
- |
. |
ID=Dca38889.1.exon1;Parent=Dca38889.1 |
| scaffold419 |
Augustus |
exon |
106025 |
106130 |
. |
- |
. |
ID=Dca38889.1.exon2;Parent=Dca38889.1 |
| scaffold419 |
Augustus |
exon |
106432 |
106471 |
. |
- |
. |
ID=Dca38889.1.exon3;Parent=Dca38889.1 |
